There are many bio-software compiled into BioInfoServOS, which also can be installed into other debian/ubuntu system with xfce4 desktop enviroment:

http://www.bioinfoserv.org/BioinfoServDeb

1.bioinfoserv-themes_2007-13-07_1.3_i386.deb

This package can edit more optimizing registered entries of program into menu.It includes more beaultiful icons, themes, boot splash etc.

2.bioinfoserv-base-directories_1.0-20_i386.deb

This package can make the diretories of bio-softwares on /usr/local/bioinf.

3.bioinfoserv-emboss_3.0.0-5_i386.deb

4.bioinfoserv-ape_1.2-3-2_i386.deb

APE (Analyses of Phylogenetics and Evolution) is a package written in R. APE aims to be both a computing tool to analyse phylogenetic and evolutionary data, and an environment to develop and implement new analytical methods.

5.bioinfoserv-proteindesktop_1.0_i386.deb

IBG GeneDesigner is an open-source product available for free download. It is still in development, but it can be used to design a nucleotide sequence for a particular protein (amino acid sequence) such that it will be optimized for the highest possible expression when used as a recombinant DNA fragment in a particular organism.
http://gridweb.cti.depaul.edu/twiki/…ew/IBG/IBGSoft

6.bioinfoserv-MassSorter

administrating and analyzing data on proteins mass spectrometry experiments

7.bioinfoserv-taxinspector_2007.07.14.1.0.3b.deb

TaxInspector is a NCBI Taxonomy browser?

8.bioinfoserv-sa_2007.07.14_1.6.0_i386.deb

The purpose of Sequence Analysis is to find out orf, design primer,enzymes digest,sequence manapunation etc.

9.bioinfoserv-arb_2007.7.11_i386.deb

The ARB software is a graphically oriented package comprising various tools for sequence database handling and data analysis.

10.bioinfoserv-act_5.0-1_i386.deb

ACT (Artemis Comparison Tool) is a DNA sequence comparison viewer based on Artemis.

11.bioinfoserv-artemis_8.0-1_i386.deb

Artemis is a free genome viewer and annotation tool that allows visualization of sequence features and the results of analyses within the context of the sequence, and its six-frame translation. Please see the file readme.bioinfoserv for suggestions about files to edit when running Artemis on BioInfoServ machines.

12.bioinfoserv-sight_2007.07.14_3.1.8_i386.deb

automating genomic data-mining without programming skills.

13.bioinfoserv-agro_1.0.18_i386.deb

The Argo Genome Browser is the Broad Institute's production tool for visualizing and manually annotating whole genomes.

14.bioinfoserv-interproscan_2007-07-14_1.01_i386.deb

InterProScan is a tool that combines different protein signature recognition methods native to the InterPro member databases into one resource with look up of corresponding InterPro and GO annotation.

15.bioinfoserv-chinook_2007.07.14_1.02_i386.deb

chinook is a peer-to-peer (P2P) bioinformatics platform.http://smweb.bcgsc.bc.ca/chinook/index.html

16.bioinfoserv-apollo_2006-2.27-1.6.5_i386

Apollo is a collaborative open source project between the Berkeley Drosophila Genome Project, the Sanger Institute and the EBI.

17.bioinfoserv-jexproler_2007.07.14_2.7_i386

J-Express Pro is a comprehensive portable software package for analysis and visualization of microarray data.
http://www.molmine.com/jexpress/

18.bioinfoserv-wise_2007.07.14.2.1.20-2_i386.deb

Wise2 is a package focused on comparisons of biopolymers, commonly DNA sequence and protein sequence.

19.bioinfoserv-phylip_3.65-2_i386.deb

PHYLIP is a free package of programs for inferring phylogenies. It is distributed as source code, documentation files, and a number of different types of executables.
http://evolution.genetics.washington.edu/phylip.html